PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36695.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 226aa    MW: 26120.4 Da    PI: 9.3722
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.66.9e-5591341128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+v+yL+++++++++++ ++i+evdiyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g+r+nrat sgyWkatg+dk+++  +++ 
  GAY36695.1   9 LPPGFRFHPTDEELIVHYLRNQATSRPCPV-SIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKY 105
                 79****************************.89***************99999*****************************************.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  g+kk Lvfykgr pkg ktdW+mheyrl
  GAY36695.1 106 LGVKKALVFYKGRPPKGIKTDWIMHEYRL 134
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEAQASTELP PGFRFHPTDE ELIVHYLRNQ ATSRPCPVSI IPEVDIYKFD PWQLPEKAEF  60
GEKEWYFFSP RDRKYPNGTR PNRATVSGYW KATGTDKAIY GGSKYLGVKK ALVFYKGRPP  120
KGIKTDWIMH EYRLNDPTRQ PHKHNGSMKV SINSVHLDDW VLCRIYKKRQ TGSRSVLDAK  180
NGINNNAASD DQFENKLQPS DMHQVNHSDS LNQQSLFVNP TVYEFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-101NAC family protein