PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29415.2 Da PI: 9.7624 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.1 | 9.5e-55 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+v+yL+++++++++++ ++i+evdiyk++Pw+Lp+k++ +ekewyfFs+rd+ky++g+r+nrat sgyWkatg+dk+++ +++ GAY36694.1 9 LPPGFRFHPTDEELIVHYLRNQATSRPCPV-SIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKY 105 79****************************.89***************99999*****************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfykgr pkg ktdW+mheyrl GAY36694.1 106 LGVKKALVFYKGRPPKGIKTDWIMHEYRL 134 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEAQASTELP PGFRFHPTDE ELIVHYLRNQ ATSRPCPVSI IPEVDIYKFD PWQLPEKAEF 60 GEKEWYFFSP RDRKYPNGTR PNRATVSGYW KATGTDKAIY GGSKYLGVKK ALVFYKGRPP 120 KGIKTDWIMH EYRLNDPTRQ PHKHNGSMKL DDWVLCRIYK KRQTGSRSVL DAKNGINNNA 180 ASDDQFENKL QPSDMHQVNH SDSLNQQSLF VNPTNTSFFN LLPVNGRSIM LSFSVEGHVR 240 TFNTLYKVAV AKQESL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-104 | NAC family protein |