PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36513.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 269aa    MW: 29716.9 Da    PI: 7.3946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11152199455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  GAY36513.1 152 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 199
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDQGSYNFAE IWQFPVPGSG SMSESGGGLG QKGAHFGQHL SQFGTNREVS GDDPVNLEHK  60
MAHGNGVRKR RDVEDESAKH VSTSSGNGNG NRVNDSDGKR IKTSGSRDDN HHSKAEAEPS  120
SVKPAEQNSQ PPEPPKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK  180
VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNTRMNPGI EVFPPKDFTQ QTFDTAGMPF  240
GSQATREYSR GTSPDWLHMQ IGGGFERMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-95bHLH family protein