PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35765.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 754aa MW: 86231.4 Da PI: 6.6262

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.8e-21	56	149	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel GAY35765.1 56 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGFPQMKPSDDGKMQRNRKSSRCGCQAYMRIVKRVdfdVPEWHVTGFSNVHNHELL 149 6*************9998874556679***************9***************99887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
MSEGNSMASE NGTDLSQDDT GTIEENPEET ILSQQTSVNL VPFIGQRFVS QDAAYEFYCS 60 FAKQCGFSIR RHRTRGKDGV GRGVTRRDFT CHRGGFPQMK PSDDGKMQRN RKSSRCGCQA 120 YMRIVKRVDF DVPEWHVTGF SNVHNHELLK LNEVRLLPAY CSITPDDKTR ICMFAKAGMS 180 VRQMLRLMEL EKGVKLGCLP FTEIDVRNLL QSFRNVNRDY DAIDLIAMCK KMKDKNPNFQ 240 YDFKMDGHNR LEHIAWSYAS SVQLYEAFGD ALVFDTTHRL DSYDMLFGIW VGLDNHGMAC 300 FFGCVLLRDE NMQSFSWSLK TLLGFMNGKA PQTLLTDQNI WLKEAVAVEM PETKHAVYIW 360 HILAKLSDSL PTFLGSSYDD WKAEFYRLYN LELEEDFEEE WSKMVNKYGL REYKHITSLY 420 ALRTFWALPF LRHYFFAGLL SPCQSEAINA FIQRILSAQS QLDRFVERVA EIVEFNDRAA 480 TKQKMQRKLQ KICLKTGSPI ESHAATVLTP YAFGKLQEEL LMAPQYASLL VDEGCFQVKH 540 HTETDGGCKV IWIPCQEHIS CSCHQFEFSG ILCRHVLRVL STDNCFQIPD QYLPIRWRNV 600 TSASTNPLRT TTRDRSEKIQ LLESMASALV SESLETEERL DVACEQVAMV LNHVKDLPRP 660 IHGMDDIAYA CPSHSLILPE VEDTDGIVQS ITVGNSHESF TLGKLKERRP RDGVDVSRKR 720 RHCSEPCCRH FGHDASSCPI MGSDTLNAEL LGYL

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

MSEGNSMASE NGTDLSQDDT GTIEENPEET ILSQQTSVNL VPFIGQRFVS QDAAYEFYCS  60
FAKQCGFSIR RHRTRGKDGV GRGVTRRDFT CHRGGFPQMK PSDDGKMQRN RKSSRCGCQA  120
YMRIVKRVDF DVPEWHVTGF SNVHNHELLK LNEVRLLPAY CSITPDDKTR ICMFAKAGMS  180
VRQMLRLMEL EKGVKLGCLP FTEIDVRNLL QSFRNVNRDY DAIDLIAMCK KMKDKNPNFQ  240
YDFKMDGHNR LEHIAWSYAS SVQLYEAFGD ALVFDTTHRL DSYDMLFGIW VGLDNHGMAC  300
FFGCVLLRDE NMQSFSWSLK TLLGFMNGKA PQTLLTDQNI WLKEAVAVEM PETKHAVYIW  360
HILAKLSDSL PTFLGSSYDD WKAEFYRLYN LELEEDFEEE WSKMVNKYGL REYKHITSLY  420
ALRTFWALPF LRHYFFAGLL SPCQSEAINA FIQRILSAQS QLDRFVERVA EIVEFNDRAA  480
TKQKMQRKLQ KICLKTGSPI ESHAATVLTP YAFGKLQEEL LMAPQYASLL VDEGCFQVKH  540
HTETDGGCKV IWIPCQEHIS CSCHQFEFSG ILCRHVLRVL STDNCFQIPD QYLPIRWRNV  600
TSASTNPLRT TTRDRSEKIQ LLESMASALV SESLETEERL DVACEQVAMV LNHVKDLPRP  660
IHGMDDIAYA CPSHSLILPE VEDTDGIVQS ITVGNSHESF TLGKLKERRP RDGVDVSRKR  720
RHCSEPCCRH FGHDASSCPI MGSDTLNAEL LGYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein