PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY35634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 26247.5 Da PI: 7.3026 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.2 | 3.6e-11 | 14 | 80 | 59 | 128 |
NAM 59 yfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Fs + k+ +g+r+ r + +g+W+ k v+s+ ++e++g kk + + k ++p+ W+mhey+l GAY35634.1 14 LYFSLK--KSVNGSRTDRRVGAGTWQGEEAGKVVVSRnSREKIGSKKRFRYEKDKSPH--DGCWIMHEYSL 80 456665..456899************9999999988867788*********9777776..89*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MQFGGPNVED GEDLYFSLKK SVNGSRTDRR VGAGTWQGEE AGKVVVSRNS REKIGSKKRF 60 RYEKDKSPHD GCWIMHEYSL NPPLLPQNLE CSDLVPCQIR KNDEPGMENS RNRKLTNLLL 120 KKTLISLHLL SRVTDTKSSV DATNRSVVLQ GSRGKLSANS HDQLQPSAQT HLIFTSSDLQ 180 GYQQMPLTDQ IPHHQLQLSV EEYQSTVQTP FILEEKQDIA VSIQHITHDQ LE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 6e-09 | NAC family protein |