PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35454.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 338aa MW: 37055.6 Da PI: 8.8321

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.8	6e-34	58	112	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl GAY35454.1 58 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 112 79****************************************************8 PP
2	Myb_DNA-binding	63.4	4.5e-20	60	111	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ GAY35454.1 60 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 111 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MISRSAMKTM YQPNSVPSSS LVRSNSLVHG QHLDCGSSQM DPMNGGNSLN NNPSLASKQR 60 LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI YHVKSHLQKY RLAKYLPDSS 120 SDGKKVDKKE TGDMLSSLDV GCKLLKHSSC RWRCKNDCMS NWRHVQRQLQ LRIEAQGKYL 180 KKIIEEQQRL SGVLTEAPGS GGSAPASGDN CQEPDKKTDP ATPAPTSESP LQDKAAKEHV 240 PAKSLSLDES FSSQNEPLTP DSGCNVSSPS QSPKGERSTK KQRVDMETAY AKPEMVLTHP 300 ILESSISSSY QQPQNVFDPS SRASVGKEDR LEVSGNDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-105	G2-like family protein