PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HSF | ||||||||
Protein Properties | Length: 363aa MW: 41146.5 Da PI: 4.5557 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 84.7 | 1.3e-26 | 14 | 110 | 2 | 100 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT......XTTSEEEEESXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks......kekiweFkhksFkkgkke 92 Fl k+ye+++d+++++++sws++++sf+v+++ +fa+++LpkyFkh+nf+SF+RQLn+Y+ + ++ ++s++ + +kk+k+ GAY34816.1 14 FLAKTYEMVDDPSTNSTVSWSSSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYNLHGQGTPLTESERqglkddI--------ERLKKEKEI 102 9************************************************************9888777663332332220........334444444 PP XXXXXXXX CS HSF_DNA-bind 93 llekikrk 100 ll +++r+ GAY34816.1 103 LLLELQRH 110 44444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MDDGQGSSNS LPPFLAKTYE MVDDPSTNST VSWSSSNKSF IVWNPPDFAR DLLPKYFKHN 60 NFSSFIRQLN TYNLHGQGTP LTESERQGLK DDIERLKKEK EILLLELQRH EQERQGFESQ 120 MQLLRERFQL MEQRQQKMVS FVGRALQKPG LESNFGVHLE NHDRKRRLPR IDYFYDEANI 180 EDNPMGTSQI VGGADSADIS SSNMEKFEQL ESSMTFWENI VQDVGQSCFQ PNSSLELDES 240 TSCADSPAIS CIQLNVDARP KSPGIDMNSE PAVTAATEPV PSKEPETATT IPVQAGVNDV 300 FWEQFLTENP GSSDAQEVQS ERKECDGKKN ENKPADHGKF WWNMRNVNSL AEQMGHLTPA 360 ERT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 163 | 168 | DRKRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18880.1 | 1e-85 | HSF family protein |