PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26165.9 Da PI: 9.0011 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 25 | 75 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g+ GAY34579.1 25 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 75 69*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MAPREKASGP VKVNGNSNGI VKEVHFRGVR KRPWGRYAAE IRDPGKKSRV WLGTFDTAEE 60 AARAYDAAAR EFRGAKAKTN FPLPSENVTN KISHNNININ NNNQSPSQSS TIESSSREPA 120 LMIDSSPLDL NLGPACAGGG AGGGFNATIR FPFQPVGGAF GAANQVFYFD PVAAMKSQQY 180 QRLRFDHHRN YNFHAAAVTA VGDGSVQSDS DSSSIVDLNH HDDKPRRVLD IDLNLPPEDF 240 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 7e-29 | ERF family protein |