PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34526.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 188aa    MW: 21037.6 Da    PI: 6.523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-11960255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                r+  + +Er+RR++++  +++L +l+P+ +   p +  s  + L +A++YIk Lq
  GAY34526.1  9 RTDRKTIERNRRNQMKALYSTLNSLVPHqR---PMEATSLPDQLDEATKYIKRLQ 60
                778899**********************66...9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MENNPSSSRT DRKTIERNRR NQMKALYSTL NSLVPHQRPM EATSLPDQLD EATKYIKRLQ  60
TNLERMKERK ERLMGIEKPD AAAATSSSGN SSGTITTGLR SPQIEIHEMG SALEVVLTTG  120
LDFQFMFIET IRLLHEEGVE IVNASFNVVE DTIFHTIHSK IGDSGSDHDA SARISERLKK  180
FGQDGSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-45bHLH family protein