PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 189aa MW: 21231.8 Da PI: 6.2524 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.1 | 2.4e-11 | 9 | 60 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 r+ + +Er+RR++++ +++L +l+P+ + p + s + L +A++YIk Lq GAY34525.1 9 RTDRKTIERNRRNQMKALYSTLNSLVPHqR---PMEATSLPDQLDEATKYIKRLQ 60 778899**********************66...9999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MENNPSSSRT DRKTIERNRR NQMKALYSTL NSLVPHQRPM EATSLPDQLD EATKYIKRLQ 60 TNLERMKERK ERLMGIEKPD AAAATSSSGN SSGTITTGLR SPQIEIHEMG SALEVVLTTG 120 LDFQFMFIET IRLLHEEGVE IVNASFNVVE DTIFHTIHSK IGDSGSDHDA SARISERLKK 180 FGQDEQNNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-45 | bHLH family protein |