PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 199aa MW: 23049.5 Da PI: 9.127 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.5 | 0.00013 | 34 | 71 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRR+++ +++ +Lr+l+ Ka+i+e A+ YI +Lq GAY34280.1 34 TAERRRREKLSNRLLTLRSLMN-----------KATIVEDAITYIEKLQ 71 68*****************975...........559***********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MEFLGSAFTQ SCITQKRGRR VYGDDRDFKS KNLTAERRRR EKLSNRLLTL RSLMNKATIV 60 EDAITYIEKL QMTVKVLSDQ LLEMESSSEE SERPRNDEIN AAEEMKKHGI EEKVEVTNVD 120 GCKLWIRIIF EKKRSRITKF LEAMASHGFE LSDTNVTTFK GATLISSCLN FFFSKKGVYS 180 YKIEAEQVKE LLQEIIKSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 41 | ERRRRE |
2 | 37 | 42 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 3e-34 | bHLH family protein |