PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34223.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 433aa MW: 49085 Da PI: 9.8101

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.9	3.5e-18	91	181	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY +YAk++GFsvrk+ ++++ +g++t r++vCskegkr+++ + +++++ ++ tr C+a+++++ ++ +g+w+ + + H+H l+p GAY34223.1 91 FYFDYAKSIGFSVRKNIMRTN-VQGQVTVRRWVCSKEGKRSKKYLElPDRKKTAKPLTRELCRATFHIRFDHrKGVWVACEWVDTHTHVLVP 181 9*************99988.8888************9988678888899***********999*************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MRQDTAVAVS VHNNGAASLE GAISDDSLSL ATCTFNSISS NQFELLLPNS EANTQPSNSD 60 RTFSSYASRD RLSESDVIGR VFSSIEEAET FYFDYAKSIG FSVRKNIMRT NVQGQVTVRR 120 WVCSKEGKRS KKYLELPDRK KTAKPLTREL CRATFHIRFD HRKGVWVACE WVDTHTHVLV 180 PAVQKHYEQQ AATIYTRTVF NRVLKELRED GLLYISNCMS DVGRRIYVIK KFKLEDRSWR 240 VVFHEADSKL VCTCHLMQSL GIPCSHSFTV MKAENLSEIP KCMILPRWTK NSKIAQSYLQ 300 HFSSKPSMNE AARIGSLTIA CRNLIHFAAK TVDSYNDAIQ VIHGLNLRAQ DVLDIDAIPR 360 ASTKGRPVDI IKDPLIIKTK GSAKTTKASV KKRLCGVMDS SNGFTFPSQD LSQNNRGGTI 420 PPQWHEWWHY NVR

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MRQDTAVAVS VHNNGAASLE GAISDDSLSL ATCTFNSISS NQFELLLPNS EANTQPSNSD  60
RTFSSYASRD RLSESDVIGR VFSSIEEAET FYFDYAKSIG FSVRKNIMRT NVQGQVTVRR  120
WVCSKEGKRS KKYLELPDRK KTAKPLTREL CRATFHIRFD HRKGVWVACE WVDTHTHVLV  180
PAVQKHYEQQ AATIYTRTVF NRVLKELRED GLLYISNCMS DVGRRIYVIK KFKLEDRSWR  240
VVFHEADSKL VCTCHLMQSL GIPCSHSFTV MKAENLSEIP KCMILPRWTK NSKIAQSYLQ  300
HFSSKPSMNE AARIGSLTIA CRNLIHFAAK TVDSYNDAIQ VIHGLNLRAQ DVLDIDAIPR  360
ASTKGRPVDI IKDPLIIKTK GSAKTTKASV KKRLCGVMDS SNGFTFPSQD LSQNNRGGTI  420
PPQWHEWWHY NVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-14	FAR1 family protein