PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY33439.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 110aa MW: 12550.2 Da PI: 4.8664 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.2 | 2.5e-17 | 8 | 106 | 1 | 93 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp G++F+P+de lv++yL +k+++++ ++ + +++ ++y + ePw++ +++ + + +++yfF++ +kk+ +g+r r + +g+W+ k+v+ GAY33439.1 8 LPLGCKFQPSDELLVQFYLFNKISETPAPFVDDlVRTENLYGSkEPWQIWRQFGGpdleDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVC 106 699************************887665488889997669****754433334356789**************************888777775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MERTRPPLPL GCKFQPSDEL LVQFYLFNKI SETPAPFVDD LVRTENLYGS KEPWQIWRQF 60 GGPDLEDGED LYFFTPLKKK SVNGSRIDRR VGTGTWQGED AGKAVCVPQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 6e-13 | NAC family protein |