PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33269.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 509aa MW: 56483.4 Da PI: 5.0216

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109	3.4e-34	75	166	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d +l+ +isw ++g+sfvv+d+ +f++ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF+++ F++g+++ll++i+ GAY33269.1 75 FLSKTFDLVDDTSLDPIISWGSTGESFVVWDPLKFSRLILPRNFKHNNFSSFVRQLNTYGFRKIDTDR---------WEFANEAFQRGRRHLLKNIR 162 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+ks GAY33269.1 163 RRKS 166 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDKKEQNYPK SPPNTTVITS AITSSLPVAT PLSMETIAFP TTVEELEAFS SFATTPAADV 60 PQPLECLHGN PIPPFLSKTF DLVDDTSLDP IISWGSTGES FVVWDPLKFS RLILPRNFKH 120 NNFSSFVRQL NTYGFRKIDT DRWEFANEAF QRGRRHLLKN IRRRKSPQSQ QIGTFIGPFS 180 EAEKSGVQGD IEQLRKERGM LMQEVVELHQ QHRGTASHME AINQRIHAAE QRQKQMVSFL 240 AKLLQNPAFL ARLKQKKEQG EIGSSRMKRK FVKHQPHELG KSDSSVEGQI VKYRPDWGNL 300 TIPNVVPESH HVPVERSPDY LLDGMVGIGS GREDMPFQFE NVASVDLAVS DELAAPGGFT 360 KAPEQMGEGA SSSGIKDSHF KEKNVMSPQQ EVRSECFVSF PQDLMKENIH DISSPGIECI 420 ATQEDIWNLG FDATAGMSSS SNELLGNLST SDVPDLGMSG GLSDIWDLSS LQAAGGSSID 480 LWSADEPPFV DPESQASPKE DDRPKDMDP

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDKKEQNYPK SPPNTTVITS AITSSLPVAT PLSMETIAFP TTVEELEAFS SFATTPAADV  60
PQPLECLHGN PIPPFLSKTF DLVDDTSLDP IISWGSTGES FVVWDPLKFS RLILPRNFKH  120
NNFSSFVRQL NTYGFRKIDT DRWEFANEAF QRGRRHLLKN IRRRKSPQSQ QIGTFIGPFS  180
EAEKSGVQGD IEQLRKERGM LMQEVVELHQ QHRGTASHME AINQRIHAAE QRQKQMVSFL  240
AKLLQNPAFL ARLKQKKEQG EIGSSRMKRK FVKHQPHELG KSDSSVEGQI VKYRPDWGNL  300
TIPNVVPESH HVPVERSPDY LLDGMVGIGS GREDMPFQFE NVASVDLAVS DELAAPGGFT  360
KAPEQMGEGA SSSGIKDSHF KEKNVMSPQQ EVRSECFVSF PQDLMKENIH DISSPGIECI  420
ATQEDIWNLG FDATAGMSSS SNELLGNLST SDVPDLGMSG GLSDIWDLSS LQAAGGSSID  480
LWSADEPPFV DPESQASPKE DDRPKDMDP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	259	ARLKQKKEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-106	HSF family protein