PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33054.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 268aa MW: 30517.7 Da PI: 6.7935

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.3	1.1e-43	6	139	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF Pt+eelv++yL++k++g++ l ++++i+ ++iy+++PwdLp+ ++ + ++w+fF++r++++a+g r+nr t++gyWkatg+ v GAY33054.1 6 PPGFRFYPTEEELVSFYLHNKLAGHRqdlnLLMDRIIPVINIYDYNPWDLPQfsqlLCHRDPEQWFFFIPRQESEARGGRPNRLTSAGYWKATGSPGLV 104 9*********************9966554445589*********9646553344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127 +s++++ vg k+t+vfy+grap+g+kt+W m+ey+ GAY33054.1 105 YSSNNRPVGEKRTMVFYRGRAPNGRKTEWKMNEYK 139 ********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MVDDYPPGFR FYPTEEELVS FYLHNKLAGH RQDLNLLMDR IIPVINIYDY NPWDLPQFSQ 60 LLCHRDPEQW FFFIPRQESE ARGGRPNRLT SAGYWKATGS PGLVYSSNNR PVGEKRTMVF 120 YRGRAPNGRK TEWKMNEYKA IDAEASTSSS SATPPPVRHE FSLCRVYKKS KSLRAFDRRP 180 PPGPGATSIG EPREVPQRAD DHRGENIHNI QMAAPERTSS PDSSSSGDDG SQPPQVGGSS 240 NCATTTATAS NNEAWWDWEW DQLDNWKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	8e-71	NAC family protein