PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY32825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | YABBY | ||||||||
Protein Properties | Length: 215aa MW: 23974.2 Da PI: 8.1634 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 227.5 | 3.6e-70 | 13 | 178 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d f +seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ a + hl++++ + ++ + e n + n +++++++ + GAY32825.1 13 DQFPTSEQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHLGHNFFSPSHNL-REEIPNPSPNFLINQTNTNDFIVP- 109 56889*****************************************999999999999999999998875543.333333333333333333333332. PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ +e+pr+p + rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+ihfgl GAY32825.1 110 -TRGVVDELPRPPATSRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 178 .3567889************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MSMSSSSTTL SLDQFPTSEQ LCYVHCNLCD TVLAVSVPCT SLFKTVTVRC GHCTNLLPVN 60 MRGLLLPSAN QFHLGHNFFS PSHNLREEIP NPSPNFLINQ TNTNDFIVPT RGVVDELPRP 120 PATSRPPEKR QRVPSAYNRF IKDEIQRIKA GNPDITHREA FSAAAKNWAH FPHIHFGLVP 180 DHQPVKKANV RQQEGEDVLM KDGFFASANV GVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-86 | YABBY family protein |