PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32471.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 367aa    MW: 40373.1 Da    PI: 4.5356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-20124174155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa+ +++a+ kl+g
  GAY32471.1 124 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAARVYDNAAIKLRG 174
                 59********.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MEQSSSLCPI KYTVHRNVTK KFTKPSLKSN KRIADERRVV RILTTDHDAT DSSSDEEGEF  60
FSRQRVKRYV SEINIETSCS NSSKNSSSNA AGAVGSNRKR VAADNMNNDA ARPLRQASQT  120
TNGKKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AARVYDNAAI KLRGPDALTN  180
FSTPPPAVEV EVEVEKPETT INVSATATVS GYESGEESHC HNLSSPTSVL NFRTHSSEES  240
EQEKPPKDEE IQGETTTTAV LSDDSSGGGD YLPLDLPFLD EFFSNVPTPE LSFFHDDGGN  300
PAAPMFQDSI FFSTDEFLDT VPQDFGGDFT FSTTSSYPSS SALCQVDDYF QDIGDLFSAD  360
PPLVGGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-46ERF family protein