PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY31993.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 292aa    MW: 34954.3 Da    PI: 8.8316
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY31993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.45.3e-2547129186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e+++++ ++k++k lWe +s +mre+g++rs++qCk+kw+nl +ryk ++++e +     ++++p++++l+
  GAY31993.1  47 QWSVQETKEFLVIRAELDRSFMETKRNKLLWEVISTRMREKGYNRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNELQ 129
                 7********************************************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEGHHQHHQH HHHHHQQQQI HQQQQQQHLQ HPPHISVNVD TSDRFPQWSV QETKEFLVIR  60
AELDRSFMET KRNKLLWEVI STRMREKGYN RSAEQCKCKW KNLVTRYKGC ETMEPEAMRQ  120
QFPFYNELQA IFASRMQRML WAETEGGSKK KAAAAVQLSS EEEDFNEESE GEKGNVMRKK  180
KKSKSSTGGA GASGSGSASS SHNFKEILEE FMKQQMQMEM QWREAFEARE NERRIKEMEW  240
RQTMEALENE RIMMDRRLRE REEQRRMREE ARAEKRDALI TALLNKLRRE DM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-54Trihelix family protein