PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028126325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 615aa MW: 69699.6 Da PI: 5.4822 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.0011 | 296 | 316 | 2 | 22 |
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 C Cgk F++ + k+H ++ XP_028126325.1 296 YCVVCGKKFKSEKQWKNHEQS 316 5*****************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence |
MASLEKRCLY EVLGLPRDCT SDEIRSAYRK LALQRHPDKL VQSGLSSSAA TASFQELVNA 60 YEVLSDPRER TWYDSHRSQI LFSDSTNSNS NSNSIPDLFS FFSNSVFSGY SDSPKGFFNV 120 YADVFHKVYS NELNFAKKLG LGLEAVKEAP LMGNLQSPYN QVSAFYGYWL GFVTVMDFCW 180 VDQYDVMAGP NRKSRRVMEE ENKKVRKKAR REYNETVRGL AEFVKKRDKR VIDMQVKRNE 240 EMERKREEER EKKKEIERLK MERARAYEEP DWAKVEEIED DNDAIEEDEK NKKELYCVVC 300 GKKFKSEKQW KNHEQSKKHK EKVVELREAF GDEEIENERE EGKEEGELGD NGFVSADDGV 360 DEVTNQFGDS FRLQKQNRGD DEAQSIEEEG FVDIDDGGSS KGVNESFGSD DDDEEASFLE 420 AMVSGHKNKK NVNPAKSSTT KTHGKNDSDE MDFMAYNNLK STRRKRGARG ERGGRYDEET 480 TTTADATETS GQFGENNGRN DGSCEGETSS HAFVENESNG KGDDQLGKSN GKGDDQLVKS 540 HKVPKQPVDK KGMPKKDAAK KEVNAKSKNS SKGKKQKATS KDSSTICDAC GEDFQSRNKL 600 HKHLDDSGHA TLKSR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 192 | 229 | RKSRRVMEEENKKVRKKARREYNETVRGLAEFVKKRDK |
2 | 203 | 211 | KKVRKKARR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74250.1 | 1e-143 | C2H2 family protein |