PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126128.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 335aa    MW: 38369.9 Da    PI: 4.9256
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.49.4e-1967149286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt+ e+  Li+a++e++ +l+rg+lk ++Weev++ + ++ g+   ++s++qC++k+e+l+kr++++k+    +       + yfd ++
  XP_028126128.1  67 WTHPETVNLIQAYQEKWYSLKRGQLKSNQWEEVAITVaARCGYdepSKSAIQCRHKLEKLRKRFRAEKQKPYPH------AWEYFDLMD 149
                     ***********************************9965667765579********************998875......599999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAATPPSSTP APPSPPTSPS PQPQDQDQDQ NHEPSSSPSP TPTPSNPESP KPLQSISPPK  60
KIQPLPWTHP ETVNLIQAYQ EKWYSLKRGQ LKSNQWEEVA ITVAARCGYD EPSKSAIQCR  120
HKLEKLRKRF RAEKQKPYPH AWEYFDLMDS MERGPLPISA RPMAMVQFHK SNPNDEEDDD  180
NDNDEEVVNE TNCIDTSKRN KSKSINHLVN APSIDWKLRS GSDRVSVIRR PCERFEEEEE  240
EEEGEDEEDE EDVVVVGGGG RETVVELAAE IKAFAERLVK MESKKMEMMR ETERYRMEME  300
NKRIEMILDS QRKIVDTIGR AFGSHNKKLK MAQDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.16e-31Trihelix family protein