PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125974.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 582aa MW: 65180.1 Da PI: 7.2165

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.3	2.7e-08	501	539	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA + gLt +qV++WF N R + XP_028125974.1 501 MFQNflHPYPKDAEKHLLAVRSGLTRSQVSNWFINARVR 539 5887779******************************88 PP
2	BELL	67.3	2.9e-22	375	443	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +++++k+ +Ll ll+ Vd++Y+q+ ++++t is+F+a+++l++ ++++++ l++iS ++++L+++i+ qi XP_028125974.1 375 RDVEAKRKQLLALLQVVDNQYNQCLDEIHTTISAFHAATELDP-QIHARFTLQRISSSYKNLRERISTQI 443 68899************************************.**********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MSDHNTIFDA MFSHRTSVPA AQSNAPHLNN QKQIAAEFPA LSMLHGEPMN NVYTGFNISN 60 LVGLLDCDAT LPRNAPLGRN TITDSSYPTN NAQVQEPYLG GMPISAASVA TILAARCGPQ 120 DNLNELATSS PCSAYPLDIL KSSVPNDYDD ALNSVYAASL NCEYDGILGA MNGKWDFDKF 180 LADYTGKIPG RTGFQSHQLM GNINPDGWIS SDNANVRSSN PSSSSKFGNE LSLSLSMCQP 240 SIIHGTSVPD QCLEISCAGV THRSLNGRQL GLETSCDSKN LSLSFGSCRP VQFPQFLSGS 300 RYLPVIQEIL AQIASYSLEN LVKMNYSASQ IGAGAKFMYS SSQHADRGYS VVGSDDFPDR 360 DARFEVQLDP VLQGRDVEAK RKQLLALLQV VDNQYNQCLD EIHTTISAFH AATELDPQIH 420 ARFTLQRISS SYKNLRERIS TQILAMGSYC NKDTREEDRS FETSFIQKQW ALQQLRRKDQ 480 QLWRPQRGLP ERSVSVLRAW MFQNFLHPYP KDAEKHLLAV RSGLTRSQVS NWFINARVRL 540 WKPMIEEMYT EMNWRKGRRN HEDTDKNHRS HKSIESQRVN MN

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MSDHNTIFDA MFSHRTSVPA AQSNAPHLNN QKQIAAEFPA LSMLHGEPMN NVYTGFNISN  60
LVGLLDCDAT LPRNAPLGRN TITDSSYPTN NAQVQEPYLG GMPISAASVA TILAARCGPQ  120
DNLNELATSS PCSAYPLDIL KSSVPNDYDD ALNSVYAASL NCEYDGILGA MNGKWDFDKF  180
LADYTGKIPG RTGFQSHQLM GNINPDGWIS SDNANVRSSN PSSSSKFGNE LSLSLSMCQP  240
SIIHGTSVPD QCLEISCAGV THRSLNGRQL GLETSCDSKN LSLSFGSCRP VQFPQFLSGS  300
RYLPVIQEIL AQIASYSLEN LVKMNYSASQ IGAGAKFMYS SSQHADRGYS VVGSDDFPDR  360
DARFEVQLDP VLQGRDVEAK RKQLLALLQV VDNQYNQCLD EIHTTISAFH AATELDPQIH  420
ARFTLQRISS SYKNLRERIS TQILAMGSYC NKDTREEDRS FETSFIQKQW ALQQLRRKDQ  480
QLWRPQRGLP ERSVSVLRAW MFQNFLHPYP KDAEKHLLAV RSGLTRSQVS NWFINARVRL  540
WKPMIEEMYT EMNWRKGRRN HEDTDKNHRS HKSIESQRVN MN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-104	TALE family protein