PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125952.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 397aa MW: 44723.1 Da PI: 5.0447

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.4e-52	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+k+ +k++++ e+++e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v XP_028125952.1 12 LAPGFRFHPTDEELVQYYLKRKACSKPFRF-EAVSEIDVYKSEPWELAglSRLKSRDLEWYFFSPVDRKYGNGSRLNRATGRGYWKATGKDRSVR 105 579***********************99.89**********85448888999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + kg+++g+kktLvf++grap+g++t+Wvmheyrl XP_028125952.1 106 H-KGQTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 139 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MSHDLAAPPT SLAPGFRFHP TDEELVQYYL KRKACSKPFR FEAVSEIDVY KSEPWELAGL 60 SRLKSRDLEW YFFSPVDRKY GNGSRLNRAT GRGYWKATGK DRSVRHKGQT IGMKKTLVFH 120 SGRAPDGKRT NWVMHEYRLV DEDLERAGVA QDAFVLCRIF QKSGLGPPNG DRYAPFIEEE 180 WDNDVSMVVP GEEAGDEMVN GDDANVEGNK LEQDTHSIKA PLHLAELPNA SQNISLVCKR 240 ERSDDCPFPC MDNSEPVSLV QNKMSKHNDP NSSQANGSED STTTTQDLFV STTTATTTTT 300 NCSSALLEFP LFESIEPKEN HPNNTLTFDA ANLEKSVPPG YLKFISNLET EILNVSMERE 360 TLKIEVMRAQ AMINILQTRI DLLNKENEDL RRVVPDV

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MSHDLAAPPT SLAPGFRFHP TDEELVQYYL KRKACSKPFR FEAVSEIDVY KSEPWELAGL  60
SRLKSRDLEW YFFSPVDRKY GNGSRLNRAT GRGYWKATGK DRSVRHKGQT IGMKKTLVFH  120
SGRAPDGKRT NWVMHEYRLV DEDLERAGVA QDAFVLCRIF QKSGLGPPNG DRYAPFIEEE  180
WDNDVSMVVP GEEAGDEMVN GDDANVEGNK LEQDTHSIKA PLHLAELPNA SQNISLVCKR  240
ERSDDCPFPC MDNSEPVSLV QNKMSKHNDP NSSQANGSED STTTTQDLFV STTTATTTTT  300
NCSSALLEFP LFESIEPKEN HPNNTLTFDA ANLEKSVPPG YLKFISNLET EILNVSMERE  360
TLKIEVMRAQ AMINILQTRI DLLNKENEDL RRVVPDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-112	NAC family protein