PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125939.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 163aa MW: 18197.7 Da PI: 8.0823 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 222.8 | 9.7e-69 | 2 | 157 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 +++ +se vCyv+CnfCntilavsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ + ++++++ + +++s s+s+ XP_028125939.1 2 SLDIASESVCYVHCNFCNTILAVSVPCSSMLTIVTVRCGHCANLLSVNMGALLQTLPHQDL-------------QLQKQQFSFEDASKDSGSSSK 83 567899********************************************99999998773.............334444444444444433333 PP YABBY 97 ss.eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + e+ ++e pr+pp +rPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_028125939.1 84 CNkFGAFESAEHEPPRMPP-VRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 157 3302335678889999999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MSLDIASESV CYVHCNFCNT ILAVSVPCSS MLTIVTVRCG HCANLLSVNM GALLQTLPHQ 60 DLQLQKQQFS FEDASKDSGS SSKCNKFGAF ESAEHEPPRM PPVRPPEKRQ RVPSAYNRFI 120 KEEIQRIKAS NPDISHREAF STAAKNWAHF PHIHFGLKLD GNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 2e-66 | YABBY family protein |