PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 252aa MW: 26591.5 Da PI: 7.8502 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14 | 0.00014 | 90 | 112 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k Fs+ L H +H XP_028125855.1 90 YKCSVCDKAFSSYQALGGHKASH 112 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 14.5 | 0.00011 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H XP_028125855.1 147 HECSICHKSFPTGQALGGHKRRH 169 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MALEALNSPT TAAPPPPYFD DMDLHCLEPW TKRKRSKRSR SENPPTEEEY LALCLIMLAR 60 GGSTASSSSS AAATATTDRH TLSPPPPASY KCSVCDKAFS SYQALGGHKA SHRKLAASAA 120 AAATTSDDHP STSAASATTL NPSGRTHECS ICHKSFPTGQ ALGGHKRRHY DGGNNNSTTN 180 ANGGAGSGVT SSEGAGSSHV HREFDLNLPA LPEFFPGLRV DCVRKSQLSG EQEVESPLPM 240 KKPRLSLMSD LD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 8e-52 | C2H2 family protein |