PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125519.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 258aa    MW: 29539.4 Da    PI: 5.6551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.5e-09170217455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++ +L+ ++P +     k +  a++L + ++Y++sLq
  XP_028125519.1 170 KHSLAERVRREKINNRLKRLQIIVPGC----YKSMGMAAMLDEIINYVHSLQ 217
                     79************************8....35699999********99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDDFRQQQLE SFSPSYAASY TDMKYMEIMD HLTEPNSTMF ENFNMTDMLE ESFMVDHQQP  60
EIQGTNFKIL PCTFESNCMN TVPVFLDMAT SSNTEDVFHE KKKRKVMEQS SSNSINMSST  120
VPGNGWKVKN DTMKKNSSGK GKKSMDYEKE ADESEEVIHV KARRGKATDK HSLAERVRRE  180
KINNRLKRLQ IIVPGCYKSM GMAAMLDEII NYVHSLQNQV EFLSMELAAA SSLYDFNLDA  240
EVISNSAGDK IHMRQGSW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106KKKRKV
2101129KKKRKVMEQSSSNSINMSSTVPGNGWKVK
3102130KKKRKVMEQSSSNSINMSSTVPGNGWKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.16e-43bHLH family protein