PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125490.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 340aa MW: 38590.2 Da PI: 5.6683

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.1e-08	179	226	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + + Y++sLq XP_028125490.1 179 NHSLAERVRREKIGERMKLLQALVPGC----DKVTGKALVLDEIISYVRSLQ 226 79**********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MATFANYQQH LSLLDPIFLQ NTSGFSQEPN TTTTTSCFSQ FYPLESLQQV PVDVSVHESK 60 VAFSHNNEAS VTNKHSTDSS SVVDKSESGE QVTQKLIATA KKRKNKDESF MTSLQSMDAR 120 EVRDKKKQKT SNGTTTTMTD EKEKKPKADK KKDQKKVPTE EVPKDYIHVR ARRGQATDNH 180 SLAERVRREK IGERMKLLQA LVPGCDKVTG KALVLDEIIS YVRSLQYQVE VLSMKLASVN 240 PMFYDFGMEL DAFMVPHETL MNYEEESPLP NVQQCNSAQF TTPNSYPLLD SSSSSLLFDH 300 QQEQIPNIFP QDNGQLLWEV DDQKLFNESG DFSNNLCYFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	129	KKRKNKDESFMTSLQSMDAREVRDKKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-53	bHLH family protein