PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125216.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 312aa MW: 34043.1 Da PI: 7.4131

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.2e-07	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC++C H+ H+ XP_028125216.1 3 IQCDVCNKGEASVFCSADEAALCASCDHRVHHAnklagkHQ 43 57****88****************9964446777776 PP
2	zf-B_box	29	2.3e-09	56	93	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 + C+ ++ek++ lfC++++ lC dC +Hk Ht+ XP_028125216.1 56 PLCDICQEKRAFLFCQQDRAILCGDCDIPIHKAneHTR 93 78*****************************8888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MMIQCDVCNK GEASVFCSAD EAALCASCDH RVHHANKLAG KHQRFSLLHP SPKQFPLCDI 60 CQEKRAFLFC QQDRAILCGD CDIPIHKANE HTRNHDRFLL TGVKLSATSS LYSSQSSSDS 120 SAANNDLLPN LKSQNSITTT TTNNKPISLQ PTIAKTVTAA TAVAITANKG VEGGGATSSI 180 SEYLIETLPG WRVDDFLDSS SPPSFGIYKT VVDEVMPFCY GDLESNLGSF SSPNNVGIWV 240 PQAPPPQYPH QYSSPNMGFG NQIDFKESKE ATINNNNNNN KSGRKWRDDV CFTVPQISPS 300 SVAASKRSRT YR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	5e-72	DBB family protein