PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028123693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 239aa MW: 25657.3 Da PI: 7.8923 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 136 | 158 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++sF++ L H r+H XP_028123693.1 136 HECSICHRSFPTGQALGGHKRRH 158 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MALEALNSPT TAFDDMDIHS LEPWMKRKRS KRPRTENPPT EEEYLALCLI MLARGGATTQ 60 THQSTDSSPS SSKPSYKCTV CDKAFHSYQA LGGHKASHRK LTGAAATTSD DQPSTSTTTT 120 TTASTTAPLN PSGRTHECSI CHRSFPTGQA LGGHKRRHYD GGNTKDNGGG SSGVISSGST 180 SQSHRDFDLN LPASPEFGMG LSVDCLRKSQ FFGDQEVESP LPMKKSRLSF PSDLGSSQD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 32 | MKRKRSKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 7e-42 | C2H2 family protein |