PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123363.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 289aa MW: 31934.2 Da PI: 8.2173

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	227	249	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ +Fs+ +L+ H + H XP_028123363.1 227 RCPQCNATFSSVTTLVEHVERvH 249 7*****************99888 PP
2	zf-C2H2	15.9	3.7e-05	261	283	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ L+ H + H XP_028123363.1 261 VCPKCSRGFRDPVALVEHVEReH 283 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MGTPAFPNLG KHCTVEDCKQ IDFLPFTCDC CHQVFCLEHR SYVKHQCPNG NKNDVTVVIC 60 PLCAKGVRLM PDQDPNISWE LHVNTDCDPS NYEKATKKRK CPVRGCREIL TFSNTIKCRD 120 CTIEHCLKHR FGPDHSCPGP KKPEATAFQF LSFLSRKEEP KPSRAPPTSS SRWSSSLLSA 180 ASSFRATAEA GMAKLSSEFS QKLQTVRDGT GQSSGGSSGN ASRQDERCPQ CNATFSSVTT 240 LVEHVERVHE RTGVMKLSID VCPKCSRGFR DPVALVEHVE REHGGTSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-118	C2H2 family protein