PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122685.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 540aa MW: 60684.1 Da PI: 7.4107

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	32	122	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ + s+ l lp kfa++ +++ +++ +led sg++W+v+l +k++g+ +++GW F ++gL+ gDfv+F+++++s f vv XP_028122685.1 32 FFKIM--IGDNFSKVLFLPPKFARTVsDLI---EQKTQLEDASGQRWTVTL--SKYDGSLAFQQGWPAFSLEHGLEIGDFVLFHYIEQSHF--VV 117 67777..334444569*****9996555...3479**********..*******************************98999..99 PP EEE-S CS B3 95 kvfrk 99 +++ k XP_028122685.1 118 QIYGK 122 99876 PP
2	B3	37.3	4.9e-12	474	531	31	90
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 e+++ + l+d+ +r W v + k+g vl++GW+ F+kan++++gD + F+ ++ se XP_028122685.1 474 ERKVLVCLRDPVSRLWPVIY--HEKQGIKVLASGWEAFCKANRIQVGDECAFEIEDVSEC 531 4678899***********..9999999**********************7655544 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MDCPIPACAK CTLNCLLIHG KNKDPSTVAT SFFKIMIGDN FSKVLFLPPK FARTVSDLIE 60 QKTQLEDASG QRWTVTLSKY DGSLAFQQGW PAFSLEHGLE IGDFVLFHYI EQSHFVVQIY 120 GKSGCEKLYF SKENSNQKKR TRANRDSSAK DEQCHTIDNV SINSMNKEGS NTSAVSGSDI 180 DISRRLPMAT TYTTSNIDNV NERLHHVPRT KCIEEPFYMI DRDSGVGQVD RLSALYDLAN 240 FEMQRTSSVG GTKEVLIEDV RPLSHVNTMP QSQAEAEIVD KLPVTEEVVS QTTLSDVPNL 300 PIVEKNKEFQ MMDNVSNQEL GNGNTSGRER RSKTRYSNNK ALISQKDTSL MESSLSMQQK 360 FAGVSKFCEF AASVQTQNCQ SGERMKVVKK EQVEMRPRKM IHGKYPEIKE CDRSSSPSMK 420 DNDHIYKVVK TEPVDATSAL SVKIPFLAVT GGLSFLELPN CLPSVSFRGR PIMERKVLVC 480 LRDPVSRLWP VIYHEKQGIK VLASGWEAFC KANRIQVGDE CAFEIEDVSE CIYKVSVDRK

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MDCPIPACAK CTLNCLLIHG KNKDPSTVAT SFFKIMIGDN FSKVLFLPPK FARTVSDLIE  60
QKTQLEDASG QRWTVTLSKY DGSLAFQQGW PAFSLEHGLE IGDFVLFHYI EQSHFVVQIY  120
GKSGCEKLYF SKENSNQKKR TRANRDSSAK DEQCHTIDNV SINSMNKEGS NTSAVSGSDI  180
DISRRLPMAT TYTTSNIDNV NERLHHVPRT KCIEEPFYMI DRDSGVGQVD RLSALYDLAN  240
FEMQRTSSVG GTKEVLIEDV RPLSHVNTMP QSQAEAEIVD KLPVTEEVVS QTTLSDVPNL  300
PIVEKNKEFQ MMDNVSNQEL GNGNTSGRER RSKTRYSNNK ALISQKDTSL MESSLSMQQK  360
FAGVSKFCEF AASVQTQNCQ SGERMKVVKK EQVEMRPRKM IHGKYPEIKE CDRSSSPSMK  420
DNDHIYKVVK TEPVDATSAL SVKIPFLAVT GGLSFLELPN CLPSVSFRGR PIMERKVLVC  480
LRDPVSRLWP VIYHEKQGIK VLASGWEAFC KANRIQVGDE CAFEIEDVSE CIYKVSVDRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	2e-14	B3 family protein