PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028121891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 180aa MW: 20411.2 Da PI: 8.3658 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.7 | 1.6e-27 | 58 | 147 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028121891.1 58 DFYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 147 6*******************************************999.9999*******************99****************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MVNQAPANQS STSSSTEGNL CHGWATLLRF YMDMEPDNDC GWKPKVGMTF DSEESAYDFY 60 NAYGGRMGFS IRREYCKKNK LTKQIISRNL VCNKEGFRKV DKRDPLTKTP RAETRTGCEA 120 RLFVKLDVNS GKFVVIDFKE KHNHELVSLD CAHMLPSQRK ISDTQAIELD LASESGLRLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-26 | FAR1 family protein |