PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028121456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 34631.9 Da PI: 8.2228 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g+W+ +++ g++R++k+c++rw++yl XP_028121456.1 14 RGAWTAAEDQILTDYIKVYGEGRWRNLPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_028121456.1 67 RGNISHDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999*****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MGRSPCCAKE GLNRGAWTAA EDQILTDYIK VYGEGRWRNL PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SHDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVHNDH 120 YRSAPSTRNK NSNQSDHDNK NPNMVSPPPP PKTNMESHPK TKSHDVVRAK AMRCSKIFIT 180 PPPQPPHKPD QTTVEPPPPP PPLLAELSSL CNGLLSSFTP EDDHPTDFML DVNMMRDVCL 240 SDLLNSDLAA AAAGLYCGGF SYSNDNNSTN DSKDILEDWT VNNGFQPNVG SNHHGFSSIL 300 ESGGGDWQFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-61 | MYB family protein |