PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120743.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 752aa MW: 84131.9 Da PI: 6.3588

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.5	3.8e-21	611	707	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++t+t+ed ++r W++++++ ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_028120743.1 611 QKVLKQSDVGNLGRIVLPKKEAETHlpQLDARDGITITMEDiGTSRIWNLRYRFwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 702 79***********************99999*****7778***99777777777777.******************..555999 PP ..EEE CS B3 91 elvvk 95 +++++ XP_028120743.1 703 KYLIR 707 88776 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MERGKNQHAR NARDARDGDG VENIVGVEDM PNPSGFDAME EDEEMMGVCD REMWLERHRG 60 DLLDVNEASI FYNDFPTLSD FPCMSSSSSS SSTPAPAKAI ASNSSSPSAS SSSSAASWAV 120 LRSDAEEDTD KKNQNNNHHD DDLVDAPPPA SMEVFHPPPP SGDIDCMDVM ETFGYMDLMD 180 SNEIWDPSSI FENENPQEFT HDQKPQIQRE DQQHHQQQNE EENDGQYMVQ SQEQRPLDEL 240 GIVFFEWLKS NKEYISAEDM RSIKLRRATV DCASKRLGST KEGKKQLLKL ILEWVEQYQL 300 QKKQPQPASE LPCQYQEHFQ NPNPNNLACN PIPPPDNTST CFSLASWMPP PLPLPPPPHY 360 DQSTAVMVAP TAFPPMGGYV GDPYSGGGLV PPHLNQNING HPNYHHPPST EYHIIDSAQT 420 WSSAQYGMAS QYSPFPENNS NNNTATGSPF PQAFAGYGNQ QYPYQYYHQG NGNGNGNGGE 480 KLARLGSSAT KEARKKRMAR QRRFLSHHRH HHHNHQNQHQ NQNAEQQEAR PGSENCTNTA 540 QANTASWIYW PPVAVPAAST GPVIAAHNAS QPRTAADRLP IQPQNYQQKP VSSDRRQQGW 600 KSEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAETHLPQLD ARDGITITME DIGTSRIWNL 660 RYRFWPNNKS RMYLLENTGD FVRANGLQEG DFIVIYSDVK CGKYLIRGVK VRQPGAKAEG 720 KKLAKGHRNQ RTASPSTGNC AASPQPSEKT VK

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MERGKNQHAR NARDARDGDG VENIVGVEDM PNPSGFDAME EDEEMMGVCD REMWLERHRG  60
DLLDVNEASI FYNDFPTLSD FPCMSSSSSS SSTPAPAKAI ASNSSSPSAS SSSSAASWAV  120
LRSDAEEDTD KKNQNNNHHD DDLVDAPPPA SMEVFHPPPP SGDIDCMDVM ETFGYMDLMD  180
SNEIWDPSSI FENENPQEFT HDQKPQIQRE DQQHHQQQNE EENDGQYMVQ SQEQRPLDEL  240
GIVFFEWLKS NKEYISAEDM RSIKLRRATV DCASKRLGST KEGKKQLLKL ILEWVEQYQL  300
QKKQPQPASE LPCQYQEHFQ NPNPNNLACN PIPPPDNTST CFSLASWMPP PLPLPPPPHY  360
DQSTAVMVAP TAFPPMGGYV GDPYSGGGLV PPHLNQNING HPNYHHPPST EYHIIDSAQT  420
WSSAQYGMAS QYSPFPENNS NNNTATGSPF PQAFAGYGNQ QYPYQYYHQG NGNGNGNGGE  480
KLARLGSSAT KEARKKRMAR QRRFLSHHRH HHHNHQNQHQ NQNAEQQEAR PGSENCTNTA  540
QANTASWIYW PPVAVPAAST GPVIAAHNAS QPRTAADRLP IQPQNYQQKP VSSDRRQQGW  600
KSEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAETHLPQLD ARDGITITME DIGTSRIWNL  660
RYRFWPNNKS RMYLLENTGD FVRANGLQEG DFIVIYSDVK CGKYLIRGVK VRQPGAKAEG  720
KKLAKGHRNQ RTASPSTGNC AASPQPSEKT VK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-84	B3 family protein