PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120523.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 275aa    MW: 31294.3 Da    PI: 7.9543
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.56.1e-07117136120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++C+ C+k+F+r  nL+ H+
  XP_028120523.1 117 FSCHVCDKTFNRYNNLQMHM 136
                     89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEPSDISLSF SDPVASSSSI HTDNTETFHF FPNRTQSSLE PLPLLSCLLR SPETKSDENK  60
PCHEDDEGIT VALHIGLPNC TIDGFVNSSE KKEDAHVAET QYWIPTPAQI LVGFTHFSCH  120
VCDKTFNRYN NLQMHMWGHG SQYRKGPESL KGSQPRAMLG IPCYCCEEEC KNNINHPRAK  180
PLKDFRTLQT HYKRKHGMKR FACRKCGKCL AVKGDWRTHE KNCGKRWLCV CGSDFKHKRS  240
LKDHIRSFGT GHGSFPNPSD GYEIRGDDDM HSFFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-103C2H2 family protein