PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028120273.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 84aa MW: 9919.72 Da PI: 10.7108 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31 | 6.5e-10 | 35 | 74 | 3 | 49 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 +GV++ k+ +W A I++ +k+++lg g+ e Aa+++++ XP_028120273.1 35 MRGVYF--KNMKWQAAIKVD-----KKQIHLGIVGSQEAAARLYDRK 74 79**99..47*********4.....5******************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
MHKCHPMYCT IGVPEVKRRK QHRTKHFENQ EPCLMRGVYF KNMKWQAAIK VDKKQIHLGI 60 VGSQEAAARL YDRKSREVAL IVRT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 21 | PEVKRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 8e-25 | ERF family protein |