PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118840.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 317aa MW: 33325.2 Da PI: 10.0501

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.1	4.4e-40	74	164	4	93
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaks 93 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s +ss++n ++++ +ks XP_028118840.1 74 TKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFStLNLSIRSSSHNTTISAPSKS 164 799****************************************************************999655566666665555533333 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MESSHLNNPP PTGTSGGSDH HHHHHHQLQS QSQPGSSSHV PSHHGPSFMG SISTELVSSS 60 TTSSTATTTT NKITKRPSKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKSDGETIEW 120 LLQQAEPAIV AATGTGTIPA NFSTLNLSIR SSSHNTTISA PSKSAPLFIN GGGGCGSAVL 180 GFHHQLSTGG YGEVSNYMTK RFKDTETTQE PGSDPKPGSI QQSTFLPAAA MWAVAPAPAN 240 GGNGFWMLPV TAAAAATAVV GGGQVEQQMW PYKGTPVQRI GGFEFPGGGL FSPVQLVQQQ 300 QPQPVVASVS RVGCIRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	5e-51	TCP family protein