PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028118081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 235aa MW: 26582.1 Da PI: 8.1111 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.8 | 2.6e-29 | 100 | 158 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 ++Dg++WrKYGqK k+++ pr+Y++C++a gCpvkkkv+rs ed++++ +tYegeH h XP_028118081.1 100 VKDGFHWRKYGQKFTKDNPSPRAYFKCSMApGCPVKKKVQRSVEDESILMVTYEGEHSH 158 58***************************99***************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDGHQYISHK EKVENLKLQL ESLSRENENL KMMIEVISDR YNILQEHVQR KTEERMSGAI 60 TTNSLDHGGI GSNKMVTADP VVKTSQVFVR AKPSEKSLIV KDGFHWRKYG QKFTKDNPSP 120 RAYFKCSMAP GCPVKKKVQR SVEDESILMV TYEGEHSHGV HYSTAVDFSS SPDHSLVSAN 180 LFRSTIDLTQ NLATDTKNED TCKRVEEYAE TLTKDPNYMM ALAKAVAHSI TKQIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 3e-42 | WRKY family protein |