PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028117813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 344aa MW: 38720 Da PI: 8.1436 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 246.3 | 1.3e-75 | 2 | 342 | 31 | 374 |
GRAS 31 aspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGl 123 +s++g+p+qR++ yf eAL++r+ r ++ + k + k+ + + +a+ + +++ P+l+ + + qaIle +++++ vH iD++i G+ XP_028117813.1 2 SSETGNPVQRIVYYFSEALRERIDReTGRVTLKRAEGGGIYGKSlVLGSSFAFLAHHQAIPFLQAIQCAGMQAILENISSATNVHLIDLQIRSGI 96 7999*********************3333333333333333222466666777779*************************************** PP GRAS 124 QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldes 217 +W+ L+qaL++R++ p l+iT+++ + + + t +rL++fA++l++pf+++++ ++++d++ e +++ +E++aV + l ++l+++ XP_028117813.1 97 HWIILMQALSERDKCPIrLLKITAFET---INVQDIVGTCKRLESFAQSLNLPFSITPIFLSDMKDFRAELVNIEADETVAVYSPTVLRSMLSRP 188 *************7665499*******...6799999******************************************************9555 PP GRAS 218 vsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312 +l d +++++k+l+P ++vv e e+++ns+sF++rf+eal ysa fd++ea + +++++r+++ +++ i+++va g er+ r + XP_028117813.1 189 DCL----DGLMRAIKKLKPAIMVVNEVELSTNSPSFVKRFIEALFSYSAYFDCFEACMQQDNKNRMVLVGIYFRDGIQSLVAVDGGERIDRSVKI 279 555....55************************************************************************************** PP GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 Wr+ + ++G+ +v+lse+ qa+ +++++ + +++++ ++l++gWk+ pL s+S+W+ XP_028117813.1 280 DVWRAFFARFGMVEVELSESSLYQARVVVNQFVcKSACHLDKNGKCLIMGWKGTPLHSLSSWK 342 *********************************9999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MSSETGNPVQ RIVYYFSEAL RERIDRETGR VTLKRAEGGG IYGKSLVLGS SFAFLAHHQA 60 IPFLQAIQCA GMQAILENIS SATNVHLIDL QIRSGIHWII LMQALSERDK CPIRLLKITA 120 FETINVQDIV GTCKRLESFA QSLNLPFSIT PIFLSDMKDF RAELVNIEAD ETVAVYSPTV 180 LRSMLSRPDC LDGLMRAIKK LKPAIMVVNE VELSTNSPSF VKRFIEALFS YSAYFDCFEA 240 CMQQDNKNRM VLVGIYFRDG IQSLVAVDGG ERIDRSVKID VWRAFFARFG MVEVELSESS 300 LYQARVVVNQ FVCKSACHLD KNGKCLIMGW KGTPLHSLSS WKFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 2e-45 | GRAS family protein |