PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117813.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 344aa    MW: 38720 Da    PI: 8.1436
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS246.31.3e-75234231374
            GRAS  31 aspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGl 123
                     +s++g+p+qR++ yf eAL++r+ r ++  + k  +      k+ +  + +a+ + +++ P+l+  + +  qaIle +++++ vH iD++i  G+
  XP_028117813.1   2 SSETGNPVQRIVYYFSEALRERIDReTGRVTLKRAEGGGIYGKSlVLGSSFAFLAHHQAIPFLQAIQCAGMQAILENISSATNVHLIDLQIRSGI 96 
                     7999*********************3333333333333333222466666777779*************************************** PP

            GRAS 124 QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldes 217
                     +W+ L+qaL++R++ p   l+iT+++     + + +  t +rL++fA++l++pf+++++  ++++d++ e  +++ +E++aV +   l ++l+++
  XP_028117813.1  97 HWIILMQALSERDKCPIrLLKITAFET---INVQDIVGTCKRLESFAQSLNLPFSITPIFLSDMKDFRAELVNIEADETVAVYSPTVLRSMLSRP 188
                     *************7665499*******...6799999******************************************************9555 PP

            GRAS 218 vsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312
                      +l    d +++++k+l+P ++vv e e+++ns+sF++rf+eal  ysa fd++ea + +++++r+++   +++  i+++va  g er+ r  + 
  XP_028117813.1 189 DCL----DGLMRAIKKLKPAIMVVNEVELSTNSPSFVKRFIEALFSYSAYFDCFEACMQQDNKNRMVLVGIYFRDGIQSLVAVDGGERIDRSVKI 279
                     555....55************************************************************************************** PP

            GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       Wr+ + ++G+ +v+lse+   qa+ +++++  +   +++++ ++l++gWk+ pL s+S+W+
  XP_028117813.1 280 DVWRAFFARFGMVEVELSESSLYQARVVVNQFVcKSACHLDKNGKCLIMGWKGTPLHSLSSWK 342
                     *********************************9999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MSSETGNPVQ RIVYYFSEAL RERIDRETGR VTLKRAEGGG IYGKSLVLGS SFAFLAHHQA  60
IPFLQAIQCA GMQAILENIS SATNVHLIDL QIRSGIHWII LMQALSERDK CPIRLLKITA  120
FETINVQDIV GTCKRLESFA QSLNLPFSIT PIFLSDMKDF RAELVNIEAD ETVAVYSPTV  180
LRSMLSRPDC LDGLMRAIKK LKPAIMVVNE VELSTNSPSF VKRFIEALFS YSAYFDCFEA  240
CMQQDNKNRM VLVGIYFRDG IQSLVAVDGG ERIDRSVKID VWRAFFARFG MVEVELSESS  300
LYQARVVVNQ FVCKSACHLD KNGKCLIMGW KGTPLHSLSS WKFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-45GRAS family protein