PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028117147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 305aa MW: 35368.6 Da PI: 8.4611 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.4 | 6.3e-19 | 16 | 106 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv +s+ l++p f+++ +g+ + +l+d+ g+ W v++ + +++++++GW++Fv++n L+ g f+vF+++g+s f +vk XP_028117147.1 16 FFKVY--LPDQSSQSLRVPPAFVKQLNGP--IPNNAILKDLGGKFWHVEI--EEAENGIYFKNGWQRFVNDNSLEFGNFLVFRYKGHSLF--HVK 102 77777..445555669*******999888..6678***************..*********************************99999..*** PP EE-S CS B3 96 vfrk 99 +fr+ XP_028117147.1 103 IFRE 106 **97 PP | |||||||
2 | B3 | 68.7 | 8e-22 | 206 | 302 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv + + + + g++ +p +f+++++++ ++s+tl + d+ +sW vkli r k ++ l++GW +F+++n Lk++D++vF+l++r++f l+v+ XP_028117147.1 206 FFKVVMAPAYINGGLMNIPATFLKSYMEEDRQSVTLLVSDKPDKSWPVKLI-RFKETTCKLSQGWLKFCRENTLKTRDVCVFELVERNDFVLKVS 299 99************************99999*******************5.55555688******************************99999 PP EE- CS B3 96 vfr 98 ++r XP_028117147.1 300 ILR 302 986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 305 aa Download sequence |
MAKRHCGRKA SYFYEFFKVY LPDQSSQSLR VPPAFVKQLN GPIPNNAILK DLGGKFWHVE 60 IEEAENGIYF KNGWQRFVND NSLEFGNFLV FRYKGHSLFH VKIFRENGCM KEEALTFEKT 120 AVSVEIEEES EEEDTCSEPI HNCKRKYSKI GRKRSENYEG KSERLECEAR SEGITKGTLR 180 LKVPRAIQGD DRALETASKF VSEFPFFKVV MAPAYINGGL MNIPATFLKS YMEEDRQSVT 240 LLVSDKPDKS WPVKLIRFKE TTCKLSQGWL KFCRENTLKT RDVCVFELVE RNDFVLKVSI 300 LRCLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-33 | B3 family protein |