PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 28049.7 Da PI: 8.9345 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 105 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp +ng +r++lg++ tae+Aa a++ a+ +++g XP_028116783.1 105 QYRGVRTRP-WGKYAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDIAAYRMRG 155 69****999.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MYAEGDFNAN FALLCSIHRD LQGEFEAPAM NSGNNPVEYC WVNNLFPCLA QNSGDLPLKE 60 NHSEDIGRLP TPAVASTTAA AIEMSNFSKS VAPPVTAAVE SKGRQYRGVR TRPWGKYAAE 120 IRDPAKNGAR VWLGTYETAE DAAVAYDIAA YRMRGSRALL NFPLRINSGE PEPVRVTGKR 180 SSADRSSSSP ASSLPSSENG CSGKRRRKKV VAKEEPVVVV PKLEEEGGER RLEIREVKKI 240 KKMDKIGCAE PNQIGPI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 204 | 245 | KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK |
2 | 205 | 246 | KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK |
3 | 206 | 247 | KRRRKKVVAKEEPVVVVPKLEEEGGERRLEIREVKKIKKMDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-43 | ERF family protein |