PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 186aa MW: 20650.7 Da PI: 9.9316 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.7 | 1e-05 | 20 | 42 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C++ F++ L H++ H XP_028116638.1 20 YKCNWCPRKFTTCQGLAGHMNAH 42 9*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEETAPESSA GLRIVEKYVY KCNWCPRKFT TCQGLAGHMN AHRSDVRYVK GCSHVRIPYY 60 RQPSATVPST FPVTFRPPSV APRLDYMPAP MPATIFTHAP ASVAVHPSFA RLGHAPLPTI 120 PPRVRVVRPR LVNRNHGFVR AFQGLERSSE TTMTDPKAGV AAQRGEEEEV TSKETVVVDL 180 ELTLGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 2e-08 | C2H2 family protein |