PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115598.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 280aa    MW: 32323.7 Da    PI: 7.9597
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.32.4e-17189616100
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                     + +p  f+e+ +gk+ +   + l+ +sg++W+v++   +k+++ ++ +GW+ F+k++  + gDf+vFk++g+  f + v+vf+ks
  XP_028115598.1  18 MHVPSGFVEHLEGKTSG--SVFLTGPSGNTWQVNF--IQKKDGLFFHEGWSAFAKDHFAEYGDFFVFKYNGD--FDFIVMVFDKS 96 
                     789*****888988655..6***************..8888999************************9885..555*****985 PP
2B357.72.1e-18178271199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f++ +t+ +v +  +l+lp +f+ eh   +   e+++++l++++g++W vkl  r + g+  + +GW  Fv++n++kegD++ F+l+  sefe++
  XP_028115598.1 178 FVSRMTKGNVKQVFILYLPPSFVMEHfpRY---ENRQIILRNQEGNQWIVKLVRRATCGS--FCAGWPAFVRDNRVKEGDMCRFELV--SEFEML 265
                     555666677777799***********6433...4457***************66666666..457********************86..59**** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++ r+
  XP_028115598.1 266 VHIARE 271
                     **9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MIDAFNIIET LFFVISSMHV PSGFVEHLEG KTSGSVFLTG PSGNTWQVNF IQKKDGLFFH  60
EGWSAFAKDH FAEYGDFFVF KYNGDFDFIV MVFDKSACEK EAAFHAKCTQ DISNFVKNKG  120
KKIVKLQENA SHEPFEGVPK SRTNTQSKAT YRKNEDGGHE LSMWEGTHEK KATHRPFFVS  180
RMTKGNVKQV FILYLPPSFV MEHFPRYENR QIILRNQEGN QWIVKLVRRA TCGSFCAGWP  240
AFVRDNRVKE GDMCRFELVS EFEMLVHIAR ENRESQQVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-17B3 family protein