PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115597.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 282aa    MW: 32544 Da    PI: 8.9449
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.2e-17219817100
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                      +p  f+e+ +gk+ +   + l+ +sg++W+v++   +k+++ ++ +GW+ F+k++  + gDf+vFk++g+  f + v+vf+ks
  XP_028115597.1  21 HVPSGFVEHLEGKTSG--SVFLTGPSGNTWQVNF--IQKKDGLFFHEGWSAFAKDHFAEYGDFFVFKYNGD--FDFIVMVFDKS 98 
                     57999**777988655..6***************..8888999************************9885..555*****985 PP
2B357.72.2e-18180273199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f++ +t+ +v +  +l+lp +f+ eh   +   e+++++l++++g++W vkl  r + g+  + +GW  Fv++n++kegD++ F+l+  sefe++
  XP_028115597.1 180 FVSRMTKGNVKQVFILYLPPSFVMEHfpRY---ENRQIILRNQEGNQWIVKLVRRATCGS--FCAGWPAFVRDNRVKEGDMCRFELV--SEFEML 267
                     555666677777799***********6433...4457***************66666666..457********************86..59**** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++ r+
  XP_028115597.1 268 VHIARE 273
                     **9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAPLVIKDDK LGARQPHFFK HVPSGFVEHL EGKTSGSVFL TGPSGNTWQV NFIQKKDGLF  60
FHEGWSAFAK DHFAEYGDFF VFKYNGDFDF IVMVFDKSAC EKEAAFHAKC TQDISNFVKN  120
KGKKIVKLQE NASHEPFEGV PKSRTNTQSK ATYRKNEDGG HELSMWEGTH EKKATHRPFF  180
VSRMTKGNVK QVFILYLPPS FVMEHFPRYE NRQIILRNQE GNQWIVKLVR RATCGSFCAG  240
WPAFVRDNRV KEGDMCRFEL VSEFEMLVHI ARENRESQQV DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-17B3 family protein