PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115596.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 293aa    MW: 33783.4 Da    PI: 8.5893
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.13.8e-19181091100
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+  ++v++++ l +p  f+e+ +gk+ +   + l+ +sg++W+v++   +k+++ ++ +GW+ F+k++  + gDf+vFk++g+  f + v+
  XP_028115596.1  18 FFKVF-LPHVNSEC-LHVPSGFVEHLEGKTSG--SVFLTGPSGNTWQVNF--IQKKDGLFFHEGWSAFAKDHFAEYGDFFVFKYNGD--FDFIVM 104
                     78888.34666666.********888999655..6***************..8888999************************9885..555*** PP

                     EE-SS CS
              B3  96 vfrks 100
                     vf+ks
  XP_028115596.1 105 VFDKS 109
                     **985 PP
2B357.62.3e-18191284199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f++ +t+ +v +  +l+lp +f+ eh   +   e+++++l++++g++W vkl  r + g+  + +GW  Fv++n++kegD++ F+l+  sefe++
  XP_028115596.1 191 FVSRMTKGNVKQVFILYLPPSFVMEHfpRY---ENRQIILRNQEGNQWIVKLVRRATCGS--FCAGWPAFVRDNRVKEGDMCRFELV--SEFEML 278
                     555666667777799***********6433...4457***************66666666..457********************86..59**** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++ r+
  XP_028115596.1 279 VHIARE 284
                     **9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MAPLVIKDDK LGARQPHFFK VFLPHVNSEC LHVPSGFVEH LEGKTSGSVF LTGPSGNTWQ  60
VNFIQKKDGL FFHEGWSAFA KDHFAEYGDF FVFKYNGDFD FIVMVFDKSA CEKEAAFHAK  120
CTQDISNFVK NKGKKIVKLQ ENASHEPFEG VPKSRTNTQS KATYRKNEDG GHELSMWEGT  180
HEKKATHRPF FVSRMTKGNV KQVFILYLPP SFVMEHFPRY ENRQIILRNQ EGNQWIVKLV  240
RRATCGSFCA GWPAFVRDNR VKEGDMCRFE LVSEFEMLVH IARENRESQQ VDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.14e-19B3 family protein