PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115594.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 308aa    MW: 35633.7 Da    PI: 8.9416
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.87.3e-174712417100
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                      +p  f+e+ +gk+ +   + l+ +sg++W+v++   +k+++ ++ +GW+ F+k++  + gDf+vFk++g+  f + v+vf+ks
  XP_028115594.1  47 HVPSGFVEHLEGKTSG--SVFLTGPSGNTWQVNF--IQKKDGLFFHEGWSAFAKDHFAEYGDFFVFKYNGD--FDFIVMVFDKS 124
                     57999**777988655..6***************..8888999************************9885..555*****985 PP
2B357.42.6e-18206299199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f++ +t+ +v +  +l+lp +f+ eh   +   e+++++l++++g++W vkl  r + g+  + +GW  Fv++n++kegD++ F+l+  sefe++
  XP_028115594.1 206 FVSRMTKGNVKQVFILYLPPSFVMEHfpRY---ENRQIILRNQEGNQWIVKLVRRATCGS--FCAGWPAFVRDNRVKEGDMCRFELV--SEFEML 293
                     555666667777799***********6433...4457***************66666666..457********************86..59**** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++ r+
  XP_028115594.1 294 VHIARE 299
                     **9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MIDAFNIIET LFFVISSMRF LQTNKQMAPL VIKDDKLGAR QPHFFKHVPS GFVEHLEGKT  60
SGSVFLTGPS GNTWQVNFIQ KKDGLFFHEG WSAFAKDHFA EYGDFFVFKY NGDFDFIVMV  120
FDKSACEKEA AFHAKCTQDI SNFVKNKGKK IVKLQENASH EPFEGVPKSR TNTQSKATYR  180
KNEDGGHELS MWEGTHEKKA THRPFFVSRM TKGNVKQVFI LYLPPSFVME HFPRYENRQI  240
ILRNQEGNQW IVKLVRRATC GSFCAGWPAF VRDNRVKEGD MCRFELVSEF EMLVHIAREN  300
RESQQVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-16B3 family protein