PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115593.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 344aa    MW: 39789.7 Da    PI: 9.199
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.75.2e-19691601100
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+  ++v++++ l +p  f+e+ +gk+ +   + l+ +sg++W+v++   +k+++ ++ +GW+ F+k++  + gDf+vFk++g+  f + v+
  XP_028115593.1  69 FFKVF-LPHVNSEC-LHVPSGFVEHLEGKTSG--SVFLTGPSGNTWQVNF--IQKKDGLFFHEGWSAFAKDHFAEYGDFFVFKYNGD--FDFIVM 155
                     78888.34666666.********888999655..6***************..8888999************************9885..555*** PP

                     EE-SS CS
              B3  96 vfrks 100
                     vf+ks
  XP_028115593.1 156 VFDKS 160
                     **985 PP
2B357.13.2e-18242335199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f++ +t+ +v +  +l+lp +f+ eh   +   e+++++l++++g++W vkl  r + g+  + +GW  Fv++n++kegD++ F+l+  sefe++
  XP_028115593.1 242 FVSRMTKGNVKQVFILYLPPSFVMEHfpRY---ENRQIILRNQEGNQWIVKLVRRATCGS--FCAGWPAFVRDNRVKEGDMCRFELV--SEFEML 329
                     555666667777799***********6433...4457***************66666666..457********************86..59**** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++ r+
  XP_028115593.1 330 VHIARE 335
                     **9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MPSISLKLFS SRFLFFNLGS LRFLLMIDAF NIIETLFFVI SSMRFLQTNK QMAPLVIKDD  60
KLGARQPHFF KVFLPHVNSE CLHVPSGFVE HLEGKTSGSV FLTGPSGNTW QVNFIQKKDG  120
LFFHEGWSAF AKDHFAEYGD FFVFKYNGDF DFIVMVFDKS ACEKEAAFHA KCTQDISNFV  180
KNKGKKIVKL QENASHEPFE GVPKSRTNTQ SKATYRKNED GGHELSMWEG THEKKATHRP  240
FFVSRMTKGN VKQVFILYLP PSFVMEHFPR YENRQIILRN QEGNQWIVKL VRRATCGSFC  300
AGWPAFVRDN RVKEGDMCRF ELVSEFEMLV HIARENRESQ QVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-18B3 family protein