PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028115129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 29049.7 Da PI: 9.2027 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.7 | 9.9e-45 | 4 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 ++pGfrF Pt+eelv++yL++k++g++ +l++vi+ + iy+++PwdLp+ +++ + ++w+fF++r++k+a+g r+nr t+sgyWka g+ XP_028115129.1 4 MAPGFRFYPTEEELVSFYLQNKLQGRQ-DLDRVIPVLYIYHYNPWDLPQfageRCRRDPEQWFFFIPRQEKEARGGRPNRLTTSGYWKAIGSPGY 97 579**********************99.66689***************646665556777*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++g+kkt+vfy+grap+g+kt+W m+eyr+ XP_028115129.1 98 VYSSRNRVIGMKKTMVFYRGRAPTGRKTEWKMNEYRA 134 ***********************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MEDMAPGFRF YPTEEELVSF YLQNKLQGRQ DLDRVIPVLY IYHYNPWDLP QFAGERCRRD 60 PEQWFFFIPR QEKEARGGRP NRLTTSGYWK AIGSPGYVYS SRNRVIGMKK TMVFYRGRAP 120 TGRKTEWKMN EYRAIEGEAS SSSAIPKLRP EFSLCRVYKK SKSLRAFDRR PSPEVPVTGQ 180 EAMVHQVIAH HGTEATTSHQ NRPTMVRIGS PESSSDEDHP NPSKTVRSDN LDMDIGNEPL 240 WDWEHLNWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-83 | NAC family protein |