PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28744.3 Da PI: 7.6335 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 92.3 | 6.1e-29 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p XP_028114487.1 89 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 176 ******************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MDFEVDGDVN GEVVGNSVDV EGSAGDENVM AGSSVARVFQ QNQDDKVSQD LCGREMVIVN 60 AFQAINNSAS VDEPYLGQEF DSEAEAHAFY NAYATRVGFI IRVSKLSRSR RDGSAIGRAL 120 VCNKEGFRMP DKREKIVRQR AETRVGCRAM ILVRKVSSGK WVVTKFVKEH THPLTPGKGR 180 RDLIYDQYPN EHDKIRELSQ QLAIEKKRAA TYKRHLEMVF EHIEEHNQSL SKKIEDIVDS 240 VREIESKEKQ SRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-104 | FAR1 family protein |