PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114456.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 164aa    MW: 19041.6 Da    PI: 10.8926
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-161559147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg++T++Ede +++++ +l ++ W++Ia +++ gRt++++k++w+++
   XP_028114456.1 15 RGNFTKQEDEFIIKLHSLLRNK-WSLIAGRLP-GRTDNEIKNYWNTH 59
                     89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MRLRWINYLR PDLKRGNFTK QEDEFIIKLH SLLRNKWSLI AGRLPGRTDN EIKNYWNTHI  60
KRELIVRGLD PQTHRPLNAI ASTTTANSKF DFRNASHSYS TLADIDLTMN QNTFKLVAMA  120
DDSSFDDGKR MPGRKQSHFN SSFISTKQSH FQSVISTVAN FQPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-46MYB family protein