PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113026.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 263aa    MW: 28729.3 Da    PI: 8.2241
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.6e-19182216135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C++ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_028113026.1 182 CQHCHAEKTPQWRAGPMGPKTLCNACGVRYKSGRL 216
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
METGLDPGAR FMVDDLLNFT LDAGDKTLTT LSSSSSLESS NPDPHHHQSL SFPEEIAEEE  60
LEWLSNKDAF PAVETCLDIL SDNPGIVLNH NSPVSVLENS TTSTSNSTTT ITSCCGGGIL  120
VPVRYPVKAR SKRPRRGFFS GLPSQQSWWS QANFKNIKQE LAPAAAAASP PQSATTTIGR  180
RCQHCHAEKT PQWRAGPMGP KTLCNACGVR YKSGRLVPEY RPASSPTFSS LMHSNSHRKV  240
MEMRRQKQMG GMVFNEACGY RVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-40GATA family protein